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Commit 6dd14574 authored by Gervaise Henry's avatar Gervaise Henry :cowboy:
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Fix ci singularity cache dir

parent a1d18adc
2 merge requests!58Develop,!56Resolve "Detect error in inferMetadata for tracking"
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.gitlab-ci.yml
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...@@ -2,7 +2,7 @@ before_script: ...@@ -2,7 +2,7 @@ before_script:
- module load python/3.6.4-anaconda - module load python/3.6.4-anaconda
- pip install --user attrs==19.1.0 pytest-pythonpath==0.7.1 pytest-cov==2.5.1 deriva==1.3.0 - pip install --user attrs==19.1.0 pytest-pythonpath==0.7.1 pytest-cov==2.5.1 deriva==1.3.0
- module load singularity/3.5.3 - module load singularity/3.5.3
- export SINGULARITY_CACHE=/project/BICF/BICF_Core/shared/gudmap/singularity_cache - export SINGULARITY_CACHEDIR=/project/BICF/BICF_Core/shared/gudmap/singularity_cache
- module load nextflow/20.01.0 - module load nextflow/20.01.0
- ln -sfn /project/BICF/BICF_Core/shared/gudmap/test_data/* ./test_data/ - ln -sfn /project/BICF/BICF_Core/shared/gudmap/test_data/* ./test_data/
- mkdir -p ~/.deriva - mkdir -p ~/.deriva
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