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Commit 47a270b6 authored by Gervaise Henry's avatar Gervaise Henry :cowboy:
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Add missing var

parent 4a52d75b
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2 merge requests!58Develop,!56Resolve "Detect error in inferMetadata for tracking"
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workflow/rna-seq.nf
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......@@ -1980,8 +1980,8 @@ process failExecutionRun {
then
#pipelineError_details=\$(echo "**Submitted metadata does not match infered:** ")
pipelineError_details=\$(echo "**Submitted metadata does not match infered:**\\n ")
pipelineError_details=\$(echo "|Metadata|Submitted value|Inferred value|\\n ")
pipelineError_details=\$(echo "|:-:|-:|-:|\\n")
pipelineError_details=\$(echo \${pipelineError_details}"|Metadata|Submitted value|Inferred value|\\n ")
pipelineError_details=\$(echo \${pipelineError_details}"|:-:|-:|-:|\\n")
if ${pipelineError_ends}
then
if [ "${endsMeta}" == "se" ]
......
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