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Commit 3e7d2beb authored by Gervaise Henry's avatar Gervaise Henry :cowboy:
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Fix tin input in unit CO

parent a2a809c7
3 merge requests!37v0.0.1,!24Develop,!23Resolve "process_RSeQC"
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......@@ -86,7 +86,7 @@ fastqc:
inferMetadata:
stage: unit
script:
- singularity run 'docker://bicf/rseqc3.0:2.0.0' tin.py -i /test_data/bam/small/Q-Y5JA_1M.se.sorted.deduped.bam -r /project/BICF/BICF_Core/shared/gudmap/references/GRCh38.p12.v31/bed/genome.bed
- singularity run 'docker://bicf/rseqc3.0:2.0.0' tin.py -i ./test_data/bam/small/Q-Y5JA_1M.se.sorted.deduped.bam -r /project/BICF/BICF_Core/shared/gudmap/references/GRCh38.p12.v31/bed/genome.bed
- pytest -m inferMetadata
integration_se:
......
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