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Commit 279a541b authored by Gervaise Henry's avatar Gervaise Henry 🤠
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Add singularity and proxy settings to biohpc nf config

parent 103fb9db
3 merge requests!37v0.0.1,!11Develop,!10Resolve "Add integration CI test"
Pipeline #5674 failed with stages
in 16 minutes and 28 seconds
...@@ -15,4 +15,15 @@ process { ...@@ -15,4 +15,15 @@ process {
container = 'docker://bicf/trimgalore:1.1' container = 'docker://bicf/trimgalore:1.1'
queue = '256GB,256GBv1,384GB' queue = '256GB,256GBv1,384GB'
} }
}
singularity {
enabled = true
cacheDir = '/project/shared/bicf_workflow_ref/singularity_images/'
}
env {
http_proxy = 'http://proxy.swmed.edu:3128'
https_proxy = 'http://proxy.swmed.edu:3128'
all_proxy = 'http://proxy.swmed.edu:3128'
} }
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