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Commit 23ed57ea authored by Gervaise Henry's avatar Gervaise Henry :cowboy:
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Change dnanexus executor

parent e96d1001
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2 merge requests!76Develop,!70Dnanexus
Pipeline #9229 failed with stages
in 2 minutes and 6 seconds
...@@ -4,16 +4,16 @@ params { ...@@ -4,16 +4,16 @@ params {
process { process {
withName:trackStart { withName:trackStart {
executor = 'local' executor = 'dnanexus'
} }
withName:getBag { withName:getBag {
executor = 'local' executor = 'dnanexus'
} }
withName:getData { withName:getData {
machineType = 'mem1_ssd1_v2_x16' machineType = 'mem1_ssd1_v2_x16'
} }
withName:parseMetadata { withName:parseMetadata {
executor = 'local' executor = 'dnanexus'
} }
withName:trimData { withName:trimData {
machineType = 'mem1_ssd1_v2_x16' machineType = 'mem1_ssd1_v2_x16'
...@@ -22,7 +22,7 @@ process { ...@@ -22,7 +22,7 @@ process {
machineType = 'mem1_ssd1_v2_x16' machineType = 'mem1_ssd1_v2_x16'
} }
withName:downsampleData { withName:downsampleData {
executor = 'local' executor = 'dnanexus'
} }
withName:alignSampleData { withName:alignSampleData {
machineType = 'mem3_ssd1_v2_x16' machineType = 'mem3_ssd1_v2_x16'
...@@ -31,7 +31,7 @@ process { ...@@ -31,7 +31,7 @@ process {
machineType = 'mem1_ssd1_v2_x16' machineType = 'mem1_ssd1_v2_x16'
} }
withName:checkMetadata { withName:checkMetadata {
executor = 'local' executor = 'dnanexus'
} }
withName:getRef { withName:getRef {
machineType = 'mem1_ssd1_v2_x16' machineType = 'mem1_ssd1_v2_x16'
...@@ -55,34 +55,34 @@ process { ...@@ -55,34 +55,34 @@ process {
machineType = 'mem1_ssd1_v2_x16' machineType = 'mem1_ssd1_v2_x16'
} }
withName:aggrQC { withName:aggrQC {
executor = 'local' executor = 'dnanexus'
} }
withName:uploadInputBag { withName:uploadInputBag {
executor = 'local' executor = 'dnanexus'
} }
withName:uploadExecutionRun { withName:uploadExecutionRun {
executor = 'local' executor = 'dnanexus'
} }
withName:uploadQC { withName:uploadQC {
executor = 'local' executor = 'dnanexus'
} }
withName:uploadProcessedFile { withName:uploadProcessedFile {
executor = 'local' executor = 'dnanexus'
} }
withName:uploadOutputBag { withName:uploadOutputBag {
executor = 'local' executor = 'dnanexus'
} }
withName:finalizeExecutionRun { withName:finalizeExecutionRun {
executor = 'local' executor = 'dnanexus'
} }
withName:failPreExecutionRun { withName:failPreExecutionRun {
executor = 'local' executor = 'dnanexus'
} }
withName:failExecutionRun { withName:failExecutionRun {
executor = 'local' executor = 'dnanexus'
} }
withName:uploadQC_fail { withName:uploadQC_fail {
executor = 'local' executor = 'dnanexus'
} }
} }
......
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