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Commit 0ab26d0d authored by Gervaise Henry's avatar Gervaise Henry 🤠
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Test for pytest for parseMetadata: supposed to pass #54

parent 2630f906
2 merge requests!37v0.0.1,!35Ci
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......@@ -38,7 +38,7 @@ parseMetadata:
- spike=$(singularity run 'docker://bicf/python3:2.0.1_indev' python3 ./workflow/scripts/parseMeta.py -r Replicate_RID -m "./test_data/meta/metaTest.csv" -p spike)
- species=$(singularity run 'docker://bicf/python3:2.0.1_indev' python3 ./workflow/scripts/parseMeta.py -r Replicate_RID -m "./test_data/meta/metaTest.csv" -p species)
- echo -e "\${endsMeta},\${endsManual},\${stranded},\${spike},\${species},\${exp},\${study},\${repRID}" > design.csv
- pytest -m pareseMetadata
- pytest -m parseMetadata
inferMetadata:
stage: unit
......
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