Skip to content
Snippets Groups Projects
Commit 2630f906 authored by Gervaise Henry's avatar Gervaise Henry :cowboy:
Browse files

Fail test for pytest for parseMetadata passed, test pass #54

parent eddf3c14
Branches
Tags
2 merge requests!37v0.0.1,!35Ci
Pipeline #7723 failed with stages
in 1 minute and 46 seconds
Hide whitespace changes
Inline Side-by-side
Showing
with 1 addition and 0 deletions
.gitlab-ci.yml
+ 1
− 0
View file @ 2630f906
......@@ -37,6 +37,7 @@ parseMetadata:
- stranded=$(singularity run 'docker://bicf/python3:2.0.1_indev' python3 ./workflow/scripts/parseMeta.py -r Replicate_RID -m "./test_data/meta/metaTest.csv" -p stranded)
- spike=$(singularity run 'docker://bicf/python3:2.0.1_indev' python3 ./workflow/scripts/parseMeta.py -r Replicate_RID -m "./test_data/meta/metaTest.csv" -p spike)
- species=$(singularity run 'docker://bicf/python3:2.0.1_indev' python3 ./workflow/scripts/parseMeta.py -r Replicate_RID -m "./test_data/meta/metaTest.csv" -p species)
- echo -e "\${endsMeta},\${endsManual},\${stranded},\${spike},\${species},\${exp},\${study},\${repRID}" > design.csv
- pytest -m pareseMetadata
inferMetadata:
......
0% or .
You are about to add 0 people to the discussion. Proceed with caution.
Finish editing this message first!
Please register or to comment