Merge requests · GUDMAP_RBK

Revert "Remove min nextflow version for 0.31.0 test"

rna-seq!20 · created Feb 14, 2020 by Gervaise Henry
updated Feb 14, 2020
Resolve "process_makeBigWig" 3 of 3 checklist items completed

rna-seq!19 · created Feb 13, 2020 by Jonathan Gesell v0.0.1
CodeReview Doing
- Merged
- 1
updated Feb 15, 2020
Resolve "process_fastqc" 3 of 3 checklist items completed

rna-seq!18 · created Feb 03, 2020 by Gervaise Henry v0.0.1
Doing
- Merged
- 4
updated Feb 04, 2020
Resolve "process_dedup" 3 of 3 checklist items completed

rna-seq!17 · created Jan 30, 2020 by Jonathan Gesell v0.0.1
CodeReview Test
updated Feb 02, 2020
Resolve "process_getRef" 3 of 3 checklist items completed

rna-seq!16 · created Jan 30, 2020 by Gervaise Henry v0.0.1
Doing
- Merged
- 6
updated Jan 30, 2020
Resolve "process_align" 0 of 4 checklist items completed

rna-seq!15 · created Jan 21, 2020 by Jonathan Gesell v0.0.1
CodeReview Doing
- Merged
- 2
updated Jan 28, 2020
Resolve "process_createManifest" 3 of 3 checklist items completed

rna-seq!14 · created Jan 18, 2020 by Gervaise Henry v0.0.1
Doing
- Merged
- 2
updated Jan 21, 2020
Develop

rna-seq!13 · created Jan 18, 2020 by Gervaise Henry 2-process_createManifest
updated Jan 18, 2020
Resolve "Make scripts input files for processes" 0 of 7 checklist items completed

rna-seq!12 · created Jan 18, 2020 by Gervaise Henry v0.0.1
updated Jan 18, 2020
Develop

rna-seq!11 · created Jan 17, 2020 by Gervaise Henry 2-process_createManifest
updated Jan 17, 2020
Resolve "Add integration CI test" 1 of 7 checklist items completed

rna-seq!10 · created Jan 15, 2020 by Gervaise Henry v0.0.1
CI/CD Doing
updated Jan 15, 2020
Update nextflow configs to include aws 1 of 7 checklist items completed

rna-seq!9 · created Jan 14, 2020 by Gervaise Henry v0.0.1
updated Jan 14, 2020
Resolve "Add automated download of bagit through deriva" 0 of 7 checklist items completed

rna-seq!8 · created Jan 14, 2020 by Gervaise Henry v0.0.1
Test enhancement
updated Jan 14, 2020
Resolve "Add CI for Trim" 0 of 7 checklist items completed

rna-seq!7 · created Jan 14, 2020 by Gervaise Henry v0.0.1
CI/CD Doing enhancement
updated Jan 14, 2020
Resolve "AWS-ify"

scrna-seq_imgen!3 · created Jan 06, 2020 by Gervaise Henry v0.2.0
Doing critical enhancement
- Merged
updated Jan 06, 2020
Add GHH version of docker image 1 of 7 checklist items completed

scrna-seq_imgen!2 · created Dec 14, 2019 by Gervaise Henry v0.2.0
Doing enhancement
- Merged
- 1
updated Dec 14, 2019
Develop

rna-seq!6 · created Dec 11, 2019 by Gervaise Henry 15-auto.bagit.download
updated Dec 11, 2019
Resolve "Fix outputs to GUDMAP/RBK standards" 0 of 7 checklist items completed

scrna-seq_imgen!1 · created Dec 07, 2019 by Gervaise Henry v0.2.0
Doing enhancement
- Merged
updated Dec 07, 2019
Resolve "Add Unit Tests for splitData and getData processes" 3 of 3 checklist items completed

rna-seq!5 · created Dec 03, 2019 by Jeremy Mathews v0.0.1
CI/CD Doing
updated Dec 03, 2019
Develop 1 of 7 checklist items completed

rna-seq!4 · created Nov 15, 2019 by Gervaise Henry v0.0.1 2-process_createManifest
- Merged
updated Nov 15, 2019