Reimplimented symbolic link of bdbag cookie.
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This comment contains a description of changes (with reason) [ ] If you've fixed a bug or added code that should be tested, add tests![ ] Documentation indocsis updated- ~~[ ] Replace dag.png with the most recent CI pipeline integrated_pe artifact
[ ] Replace software_versions_mqc.yaml with the most recent CI pipeline generateVersions artifact[ ] Replace software_references_mqc.yaml with the most recent CI pipeline generateVersions artifact-
CHANGELOG.mdis updated -
README.mdis updated [ ]LICENSE.mdis updated with new contributors[ ] Docker images moved to production release and changed in pipeline[ ] Docker images used in the CI unit tests match those used in pipeline
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Closes #132 (closed)
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changed milestone to %v2.0.1
17 17 18 18 Authentication: 19 19 ---------------- 20 The consortium server used must be authentificated with the [deriva authentication client](https://github.com/informatics-isi-edu/gudmap-rbk/wiki/), and remain authentificated till the end of the pipeline run. Prematurely closing the client will result in invalidation of the tokens, and may result in the pipeline failure. The use of long-lived "globus" tokens is on the roadmap for use in the future. 20 The consortium server used must be authentificated with the [deriva authentication client](https://github.com/informatics-isi-edu/gudmap-rbk/wiki/), and remain authentificated till the end of the pipeline run. Prematurely closing the client will result in invalidation of the tokens, and may result in the pipeline failure. The use of long-lived "globus" tokens is on the roadmap for use in the future. If you are using [v2.0.0](https://git.biohpc.swmed.edu/gudmap_rbk/rna-seq/-/tags/v2.0.0) you will be required to make a link for bdbag cookie. Below is the code to run: - Resolved by Gervaise Henry
enabled an automatic merge when the pipeline for 198b3a7e succeeds
mentioned in commit 29f90cdf