Merge requests · BICF

11 fastqcoptimize

BICF/Astrocyte/cellranger_mkfastq!10 · created Apr 11, 2019 by Jonathan Gesell
bug
- Merged
- 1
updated Apr 12, 2019
25 pairedend qc

BICF/Astrocyte/chipseq_analysis!15 · created Jan 05, 2019 by Venkat Malladi master
- Merged
- 1
updated Jan 06, 2019
27 pdfs plots

BICF/Astrocyte/chipseq_analysis!19 · created Jan 31, 2019 by Venkat Malladi master
updated Jan 31, 2019
39 aws

BICF/Astrocyte/cellranger_mkfastq!57 · created Dec 31, 2019 by Gervaise Henry v2.1.5
updated Dec 31, 2019
5 correct config

BICF/Astrocyte/sra_pipeline!20 · created Jul 01, 2019 by Jonathan Gesell
Bug fixes
updated Jul 01, 2019
6 docker integration

BICF/Astrocyte/sra_pipeline!26 · created Jul 09, 2019 by Jonathan Gesell
testing
updated Jul 09, 2019
6 docker integration

BICF/Astrocyte/sra_pipeline!25 · created Jul 08, 2019 by Jonathan Gesell
testing
updated Jul 08, 2019
6 docker integration

BICF/Astrocyte/sra_pipeline!23 · created Jul 05, 2019 by Jonathan Gesell
testing
updated Jul 05, 2019
Add -B option to output in fastq basecode format; Update Docs; Fix multiple Runs

BICF/Astrocyte/sra_pipeline!54 · created Mar 26, 2020 by Jeremy Mathews
Bug fixes error correction
- Merged
- 10
updated Jun 01, 2020
Add Check Design File

BICF/Astrocyte/sra_pipeline!32 · created Aug 07, 2019 by Jeremy Mathews
updated Aug 07, 2019
add collaborations readme and images

onboarding!3 · created Jan 14, 2019 by Spencer Barnes
- Merged
- 2
updated Jan 14, 2019
Add DOI badge

BICF/Astrocyte/cellranger_count!36 · created Apr 27, 2019 by Gervaise Henry v1.1.0
documentation
updated Apr 27, 2019
Add DOI to readme

BICF/Astrocyte/cellranger_mkfastq!25 · created Apr 26, 2019 by Venkat Malladi v1.2.0
To Do documentation
updated Apr 26, 2019
Added in more members.

onboarding!4 · created Jan 14, 2019 by Venkat Malladi
- Merged
updated Jan 14, 2019
Added logic to allow for multiple SRAs to be linked to a single number, while...

BICF/Astrocyte/sra_pipeline!57 · created Apr 30, 2020 by Jonathan Gesell 15-SOLID_Sequencing
Bug fixes Doing
updated May 26, 2020
Added parallel decompression of BCL file using pigz

BICF/Astrocyte/cellranger_mkfastq!1 · created Mar 21, 2019 by Jonathan Gesell master
updated Mar 21, 2019
added RNAseq fixing markdown

onboarding!6 · created Apr 26, 2019 by Holly Ruess
- Merged
updated Apr 26, 2019
Added second configuration file for Astrocyte.

BICF/Astrocyte/sra_pipeline!29 · created Jul 18, 2019 by Jonathan Gesell Astrocyte Functionality
testing
updated Jul 18, 2019
add help desk markdown

onboarding!2 · created Jan 04, 2019 by Holly Ruess
- Merged
- 2
updated Jan 08, 2019
add Holly's ORCID

onboarding!1 · created Dec 13, 2018 by Holly Ruess
- Merged
- 2
updated Dec 13, 2018