Merge requests · BICF

WIP: Resolve "Update RNASeq Shiny Code"

BICF/Astrocyte/rnaseq!2 · created Jun 20, 2018 by Danni Luo
- Closed
updated Nov 19, 2018
WIP: Resolve "Update documentation"

BICF/Astrocyte/chipseq_analysis!34 · created Apr 26, 2019 by Holly Ruess 1.0.0 master
documentation enhancement
- Closed
updated Apr 29, 2019
WIP: Resolve "Update documentation"

BICF/Astrocyte/chipseq_analysis!33 · created Apr 26, 2019 by Holly Ruess 1.0.0 master
documentation enhancement
- Closed
updated Apr 29, 2019
WIP: Resolve "Testing fails on new update"

BICF/Astrocyte/chipseq_analysis!59 · created Sep 16, 2019 by Venkat Malladi 1.1.1 master
bug
- Closed
updated Sep 16, 2019
WIP: Resolve "Remove unnecessary columns from design file"

BICF/Astrocyte/atacseq_analysis!1 · created Dec 04, 2019 by Holly Ruess Version 2.0 master
- Closed
updated Dec 04, 2019
WIP: Resolve "Fix Trim Reads"

BICF/Astrocyte/atacseq_analysis!6 · created Dec 11, 2019 by Holly Ruess Version 2.0 master
enhancment
- Closed
updated Dec 11, 2019
WIP: Resolve "Fix Trim Reads"

BICF/Astrocyte/atacseq_analysis!5 · created Dec 11, 2019 by Holly Ruess Version 2.0 master
enhancment
- Closed
updated Dec 11, 2019
WIP: Resolve "Fix Trim Reads"

BICF/Astrocyte/atacseq_analysis!4 · created Dec 11, 2019 by Holly Ruess Version 2.0 master
enhancment
- Closed
updated Dec 11, 2019
WIP: Resolve "Cancer Gene Table"

BICF/KCE/kce_etl!2 · created Oct 24, 2019 by Venkat Malladi
- Closed
updated Oct 24, 2019
WIP: Resolve "Add in current chip-analysis functionality."

BICF/Astrocyte/chipseq_analysis!17 · created Jan 11, 2019 by Venkat Malladi 1.0.0 master
enhancement
- Closed
updated Jan 11, 2019
WIP: Resolve "Add fragment size distribution"

BICF/Astrocyte/atacseq_analysis!23 · created Jun 02, 2020 by Holly Ruess Version 2.0 master
enhancment
- Closed
updated Jun 02, 2020
WIP: Aws

BICF/Astrocyte/sra_pipeline!41 · created Oct 08, 2019 by Jonathan Gesell AWS Functionality
Updates testing
- Closed
updated Oct 08, 2019
WIP: Astrocyte 0.4.0 0 of 7 checklist items completed

BICF/Astrocyte/cellranger_mkfastq!71 · created Sep 07, 2020 by Venkat Malladi
updated Jun 22, 2021
Vizapp

BICF/Astrocyte/cellranger_mkfastq!51 · created Aug 27, 2019 by Jeremy Mathews
- Closed
updated Aug 27, 2019
Vizapp

BICF/Astrocyte/cellranger_mkfastq!50 · created Aug 27, 2019 by Gervaise Henry
updated Aug 27, 2019
Vizapp

BICF/Astrocyte/variant_germline!2 · created Aug 15, 2019 by Jeremy Mathews
updated Aug 15, 2019
Update to test with new astrocyte runner. 0 of 4 checklist items completed

BICF/Astrocyte/chipseq_analysis!66 · created Mar 19, 2020 by Venkat Malladi 1.1.0 master
- Merged
- 1
updated Mar 21, 2020
Update to 2.0.0 compliance, and updated config file to be more universal.

BICF/Astrocyte/sra_pipeline!47 · created Jan 16, 2020 by Jonathan Gesell Singularity 2.0.0 Compatability
Updates
- Merged
updated Jan 16, 2020
Update the syntax and format of documentation.

onboarding!10 · created May 18, 2019 by Venkat Malladi
- Merged
updated May 18, 2019
Update tests and import of yaml.

BICF/Astrocyte/chipseq_analysis!24 · created Apr 20, 2019 by Venkat Malladi 1.0.0 master
bug
updated Apr 20, 2019