Merge requests · BICF

Updated Zenodo id 0 of 7 checklist items completed

BICF/Astrocyte/cellranger_count!77 · created Aug 15, 2020 by Venkat Malladi 2.2.0
To Do
- Closed
- 3
updated Aug 15, 2020
Update CHANGELOG.md with new v1.1.0 change information.

BICF/Astrocyte/sra_pipeline!60 · created Jun 17, 2020 by Jonathan Gesell
Updates
- Closed
updated Jun 17, 2020
WIP: Resolve "Add fragment size distribution"

BICF/Astrocyte/atacseq_analysis!23 · created Jun 02, 2020 by Holly Ruess Version 2.0 master
enhancment
- Closed
updated Jun 02, 2020
Resolve "TSS enrichment score" 0 of 6 checklist items completed

BICF/Astrocyte/atacseq_analysis!21 · created May 28, 2020 by Holly Ruess Version 2.0 master
enhancment
- Closed
updated May 28, 2020
Resolve "Add FRiP score" 0 of 6 checklist items completed

BICF/Astrocyte/atacseq_analysis!19 · created May 13, 2020 by Holly Ruess Version 2.0 master
enhancment
- Closed
- 1
updated May 13, 2020
Update main.nf to replace 'singularity exec' with 'singularity run' to avoid...

BICF/Astrocyte/sra_pipeline!49 · created Feb 06, 2020 by Jonathan Gesell Singularity 2.0.0 Compatability
Bug fixes
- Closed
updated Feb 06, 2020
Develop

BICF/Astrocyte/cellranger_mkfastq!58 · created Jan 06, 2020 by Gervaise Henry v2.1.5 master
- Closed
updated Jan 06, 2020
WIP: Resolve "Fix Trim Reads"

BICF/Astrocyte/atacseq_analysis!6 · created Dec 11, 2019 by Holly Ruess Version 2.0 master
enhancment
- Closed
updated Dec 11, 2019
WIP: Resolve "Fix Trim Reads"

BICF/Astrocyte/atacseq_analysis!5 · created Dec 11, 2019 by Holly Ruess Version 2.0 master
enhancment
- Closed
updated Dec 11, 2019
WIP: Resolve "Fix Trim Reads"

BICF/Astrocyte/atacseq_analysis!4 · created Dec 11, 2019 by Holly Ruess Version 2.0 master
enhancment
- Closed
updated Dec 11, 2019
WIP: Resolve "Remove unnecessary columns from design file"

BICF/Astrocyte/atacseq_analysis!1 · created Dec 04, 2019 by Holly Ruess Version 2.0 master
- Closed
updated Dec 04, 2019
Remove publish dirs for intermediate processes

BICF/Astrocyte/cellranger_mkfastq!55 · created Nov 07, 2019 by Gervaise Henry v2.1.5
enhancement
- Closed
updated Nov 07, 2019
WIP: Resolve "Cancer Gene Table"

BICF/KCE/kce_etl!2 · created Oct 24, 2019 by Venkat Malladi
- Closed
updated Oct 24, 2019
WIP: Aws

BICF/Astrocyte/sra_pipeline!41 · created Oct 08, 2019 by Jonathan Gesell AWS Functionality
Updates testing
- Closed
updated Oct 08, 2019
Updated to most recent images

BICF/Astrocyte/sra_pipeline!39 · created Oct 01, 2019 by Jonathan Gesell
Updates
- Closed
updated Oct 01, 2019
Resolve "Update to bicfbase:1.1"

BICF/Astrocyte/sra_pipeline!38 · created Oct 01, 2019 by Jonathan Gesell
Updates
- Closed
updated Oct 01, 2019
Update lab_orcids.md

onboarding!13 · created Sep 19, 2019 by Mingjie Li
- Closed
updated Sep 26, 2019
WIP: Resolve "Testing fails on new update"

BICF/Astrocyte/chipseq_analysis!59 · created Sep 16, 2019 by Venkat Malladi 1.1.1 master
bug
- Closed
updated Sep 16, 2019
Remove spaces from design file

BICF/Astrocyte/cellranger_mkfastq!52 · created Aug 29, 2019 by Jeremy Mathews v2.1.5
bug confirmed
- Closed
updated Aug 29, 2019
Vizapp

BICF/Astrocyte/cellranger_mkfastq!51 · created Aug 27, 2019 by Jeremy Mathews
- Closed
updated Aug 27, 2019