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Gearification of Sybil Lung Cancer Risk Prediction (https://github.com/reginabarzilaygroup/Sybil)
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cox regression
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R code for subsample correlation analysis as used in Thody et al. 2022.
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Multiple Fisher's exact tests for differential alternative splicing detection using RNA-seq data
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A vagrant box containing the setup necessary for building singularity images
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BioHPC Singularity tree with non-core patches
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Source codes to perform simulations of microtubule growth. McCormick and Cleary et al. 2023 (in preparation), "Interface-acting nucleotide controls polymerization dynamics at microtubule plus- and minus-ends".
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Source codes to perform simulations of microtubule growth. Cleary et al. 2022, Elife, "Measurements and simulations of microtubule growth imply strong longitudinal interactions and reveal a role for GDP on the elongating end".
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Instructions to login into BioHPC and adding SSH key to GitHub profile
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