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GUDMAP_RBK / scRNA-seq_imgen
MIT LicenseUpdated -
Amritha Achuthkumar / chipseq_analysis
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cutandrun pipeline from https://github.com/nf-core/cutandrun
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Astrocyte / Workflows / BICF / chipseq_analysis
MIT LicenseUpdated -
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An Astrocyte workflow to run cellranger count on droplet-based single cell RNA data generated by 10x Genomics.
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Affiong Akpaninyang / atacseq_analysis
MIT LicenseUpdated -
Felix Perez / chipseq_analysis_containerized
MIT LicenseUpdated -
A general purpose Astrocyte workflow to run quality control on single cell RNA sequencing data.
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Astrocyte / Workflows / Strand Lab / cellbender
BSD 3-Clause "New" or "Revised" LicenseAn Astrocyte workflow to clean single cell or single nucleus RNA data of technical artifacts using the tool CellBender.
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Astrocyte / Workflows / Strand Lab / cellxgene
MIT LicenseAn Astrocyte workflow for interactive visualization and exploration of single cell data using CZ CELLxGENE.
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An example workflow package for the BioHPC Astrocyte workflow engine.
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