Explore projects

Implementations of the Kalata filters described in D.S. O'Kelly, Y. Guo, R.P. Mason. Evaluating online filtering algorithms to enhance dynamic multispectral optoacoustic tomography, Photoacoustics (2020)

An Astrocyte workflow to run cellranger count on droplet-based single cell RNA data generated by 10x Genomics.

An R program to visualize, normalize, and analyze -omics data such as those from microarray, metabolomics and proteomics experiments. Data are supplied as a list or table along with parameter settings, all in an Excel file.

This repository contains scripts for ChIP-seq and RNA-seq analysis used in ARF paper

Fork of matteofigliuzzi/bmDCA repository for Boltzmann-machine Direct Coupling Analysis (bmDCA).

Autoregressive networks for protein

An Astrocyte workflow for interactive visualization and exploration of single cell data using CZ CELLxGENE.

A general purpose Astrocyte workflow to run quality control on single cell RNA sequencing data.