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Commit 254ac382 authored by Jeremy Mathews's avatar Jeremy Mathews
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fix spacing

parent 266c57a7
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......@@ -231,14 +231,14 @@ def generate_design(paired, cutoff_ratio, design_df, cwd, no_reps, no_unique_con
# Make 2 self psuedoreplicates
self_pseudoreplicates_dict = {}
for rep, tag_file in zip(design_df['replicate'], design_df['tag_align']):
for rep, tag_file in zip(design_df['replicate'], design_df['tag_align']):
replicate_prefix = experiment_id + '_' + str(rep)
self_pseudoreplicates_dict = self_psuedoreplication(tag_file, replicate_prefix, paired)
# Update design to include new self pseudo replicates
pool_pseudoreplicates_dict = {}
for rep, pseudorep_file in self_pseudoreplicates_dict.items():
for rep, pseudorep_file in self_pseudoreplicates_dict.items():
path_to_file = cwd + '/' + pseudorep_file
replicate = rep + 1
design_new_df.loc[replicate, 'tag_align'] = path_to_file
......
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