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Strand Lab
StrandLab2.net
Commits
b4c08f18
Commit
b4c08f18
authored
5 years ago
by
Gervaise Henry
Browse files
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Change back to GHH S3 hosted data, and hide donor huPr shallow data
parent
42496bef
Branches
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Tags
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3 merge requests
!9
Develop
,
!7
Develop
,
!6
Add.multiple.data
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3 changed files
content/sc.data/hu.donor.pr.deep.md
+2
-2
2 additions, 2 deletions
content/sc.data/hu.donor.pr.deep.md
content/sc.data/hu.donor.pr.shallow.md
+1
-1
1 addition, 1 deletion
content/sc.data/hu.donor.pr.shallow.md
layouts/custom/hu.donor.deep.html
+4
-4
4 additions, 4 deletions
layouts/custom/hu.donor.deep.html
with
7 additions
and
7 deletions
content/sc.data/hu.donor.pr.deep.md
+
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b4c08f18
---
title
:
"
Human
Donor
Prostate
(deep)
"
title
:
"
Human
Donor
Prostate"
description
:
"
Single-Cell
RNA-sequencing
Data"
name
:
"
Human
Donor
(additional
sequencing
depth
of
data
published
in
Henry
GH.
et
al,
Cell
Reports,2018)"
name
:
"
Human
Donor
(additional
sequencing
depth
of
data
published
in
Henry
GH.
et
al,
Cell
Reports,2018
and
projected
in
UMAP
space
)"
date
:
2019-12-24T21:46:39-06:00
draft
:
false
weight
:
"
1"
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content/sc.data/hu.donor.pr.shallow.md
+
1
−
1
View file @
b4c08f18
...
...
@@ -3,7 +3,7 @@ title: "Human Donor Prostate (shallow)"
description
:
"
Single-Cell
RNA-sequencing
Data"
name
:
"
Human
Donor
(original
sequencing
depth
published
in
Henry
GH.
et
al,
Cell
Reports,2018)"
date
:
2019-12-24T21:46:39-06:00
draft
:
fals
e
draft
:
tru
e
weight
:
"
2"
type
:
"
custom"
layout
:
"
hu.donor.shallow"
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layouts/custom/hu.donor.deep.html
+
4
−
4
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b4c08f18
...
...
@@ -94,7 +94,7 @@
the prostate of three 18-38 year old organ donors using the 10x Genomics platform. The cells were
clustered and identified by correlation of their transcriptomes to known cell types. Gene expression can
be compared by population identity, cell lineage, patient, or dissected prostatic zone. This data is the
result of additional sequencing done on the same samples post publication.
result of additional sequencing done on the same samples post publication
, and projected in UMAP space
.
</span>
</div>
</div>
...
...
@@ -178,13 +178,13 @@
document
.
getElementById
(
"
label.populations
"
).
innerHTML
=
"
Separated by
"
+
$
(
"
#populations
"
).
val
().
toUpperCase
()
document
.
getElementById
(
"
label.ClusterVis
"
).
innerHTML
=
"
Cluster Visualization
"
var
img
=
document
.
getElementById
(
"
img.ClusterVis
"
);
img
.
src
=
"
https://s3.us-east-2.amazonaws.com/
data.
images.gse117403.deep/images/
"
+
$
(
"
#populations
"
).
val
()
+
"
/umap.png
"
img
.
src
=
"
https://s3.us-east-2.amazonaws.com/images.gse117403.deep/images/
"
+
$
(
"
#populations
"
).
val
()
+
"
/umap.png
"
document
.
getElementById
(
"
label.Feature
"
).
innerHTML
=
"
Feature Plot
"
var
img
=
document
.
getElementById
(
"
img.Feature
"
);
img
.
src
=
"
https://s3.us-east-2.amazonaws.com/
data.
images.gse117403.deep/images/umap/
"
+
"
genes/
"
+
_gene
+
"
_1.png
"
img
.
src
=
"
https://s3.us-east-2.amazonaws.com/images.gse117403.deep/images/umap/
"
+
"
genes/
"
+
_gene
+
"
_1.png
"
document
.
getElementById
(
"
label.ViolinBox
"
).
innerHTML
=
"
Violin Box Plot
"
var
img
=
document
.
getElementById
(
"
img.ViolinBox
"
);
img
.
src
=
"
https://s3.us-east-2.amazonaws.com/
data.
images.gse117403.deep/images/ViolinBox/
"
+
$
(
"
#populations
"
).
val
()
+
"
/genes/
"
+
_gene
+
"
_1.png
"
img
.
src
=
"
https://s3.us-east-2.amazonaws.com/images.gse117403.deep/images/ViolinBox/
"
+
$
(
"
#populations
"
).
val
()
+
"
/genes/
"
+
_gene
+
"
_1.png
"
return
(
_gene
)
});
</script>
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