Commit 21d8e052 authored by Brandi Cantarel's avatar Brandi Cantarel
Browse files

adding submodules

parent 8747d42f
Pipeline #1661 failed with stage
in 21 seconds
......@@ -4,12 +4,14 @@
variables:
RUNDIR: "/project/BICF/BICF_Core/shared/astrocyte_test_ci/rnaseq_test"
TEST_BRANCH: "master"
GIT_SUBMODULE_STATEGY: recursive
before_script:
- module load nextflow/0.27.6
- mkdir -p "${RUNDIR}"
- ln -s /project/shared/bicf_workflow_ref/workflow_testdata/rnaseq/* ${RUNDIR}/test_data/
- echo $RUNDIR
- ln -s /project/shared/bicf_workflow_ref/workflow_testdata/rnaseq ${RUNDIR}/test_data
- ls -l ${RUNDIR}/test_data/
stages:
- integration
......
Subproject commit b6d2f6898ecc1890b4df305e9505bdaa5eace4a6
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