Only run certain tests on branches vs master.

.gitlab-ci.yml

@@ -17,6 +17,10 @@ user_configuration:
 
 single_end_mouse:
   stage: single
+  only:
+    - master
+  except:
+    - branches
   script:
   - nextflow run workflow/main.nf -resume
   - pytest -m singleend
@@ -25,6 +29,10 @@ single_end_mouse:
 
 paired_end_human:
   stage: single
+  only:
+    - branches
+  except:
+    - master
   script:
   - nextflow run workflow/main.nf --designFile "$CI_PROJECT_DIR/test_data/design_ENCSR729LGA_PE.txt" --genome 'GRCh38' --pairedEnd true -resume
   - pytest -m pairedend
@@ -33,6 +41,10 @@ paired_end_human:
 
 single_end_diff:
   stage: multiple
+  only:
+    - branches
+  except:
+    - master
   script:
   - nextflow run workflow/main.nf --designFile "$CI_PROJECT_DIR/test_data/design_diff_SE.txt" --genome 'GRCm38' -resume
   - pytest -m singlediff
@@ -40,6 +52,10 @@ single_end_diff:
     expire_in: 2 days
 
 paired_end_diff:
+  only:
+    - master
+  except:
+    - branches
   stage: multiple
   script:
   - nextflow run workflow/main.nf --designFile "$CI_PROJECT_DIR/test_data/design_diff_PE.txt" --genome 'GRCh38' --pairedEnd true -resume