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Commit e5b53e04 authored by Gervaise Henry's avatar Gervaise Henry 🤠
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Add library options to astrocyte yml

parent 79e40633
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astrocyte_pkg.yml
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...@@ -140,9 +140,12 @@ workflow_parameters: ...@@ -140,9 +140,12 @@ workflow_parameters:
default: 'auto' default: 'auto'
choices: choices:
- ['auto', 'Auto Detect'] - ['auto', 'Auto Detect']
- ['3GEX', '3prime GEX Auto (3prime Gene Expression)']
- ['3GEXv3', '3prime GEX v3 (3prime Gene Expression)'] - ['3GEXv3', '3prime GEX v3 (3prime Gene Expression)']
- ['3GEXv2', '3prime GEX v2 (3prime Gene Expression)'] - ['3GEXv2', '3prime GEX v2 (3prime Gene Expression)']
- ['5GEX', '5prime GEX Auto (5prime Gene Expression)'] - ['5GEX', '5prime GEX Auto (5prime Gene Expression)']
- ['5GEXPE', '5prime GEX both R1 and R2 used for alignment (5prime Gene Expression)']
- ['5GEXSE', '5prime GEX only R2 used for alignment (5prime Gene Expression)']
required: true required: true
description: | description: |
10x single cell gene expression chemistry version (only used in cellranger version 3.x). 10x single cell gene expression chemistry version (only used in cellranger version 3.x).
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