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Commit 2436e60f authored by Jeremy Mathews's avatar Jeremy Mathews
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new test

parents e483e11a 4daaf239
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4 merge requests!53Develop,!51Resolve "Add pytest to CI",!50Resolve "Add pytest to CI",!49Resolve "Add pytest to CI"
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......@@ -35,7 +35,7 @@ simple_1:
except:
- tags
script:
- nextflow run workflow/main.nf --fastq "$CI_PROJECT_DIR/test_data/hu.v3s1r500/*.fastq.gz" --designFile "$CI_PROJECT_DIR/test_data/hu.v3s1r500/design.csv" --genome 'GRCh38-3.0.0' --kitVersion 'three' --version '3.0.2'
- nextflow run workflow/main.nf --fastq "$CI_PROJECT_DIR/test_data/hu.v3s1r500/*.fastq.gz" --designFile "$CI_PROJECT_DIR/test_data/hu.v3s1r500/design.csv" --genome 'GRCh38-3.0.0' --kitVersion 'auto' --version '3.0.2'
- pytest -m count302
artifacts:
name: "$CI_JOB_NAME"
......
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