Commit 3178fa73 authored by Venkat Malladi's avatar Venkat Malladi

Fix bwa Index name.

parent f0c48d34
Pipeline #7297 passed with stages
in 424 minutes and 28 seconds
......@@ -53,9 +53,9 @@ if (params.astrocyte) {
}
// Check inputs
if(params.bwa) {
bwa= Channel
.fromPath(params.bwa)
if(params.bwaIndex) {
bwaIndex = Channel
.fromPath(params.bwaIndex)
.ifEmpty { exit 1, "BWA index not found: ${params.bwaIndex}" }
} else {
exit 1, "No reference genome specified."
......
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