Merge branch 'master' of git.biohpc.swmed.edu:BICF/Astrocyte/process_scripts (a0f3cd94) · Commits · NGS CLIA Lab / process_scripts · GitLab

Skip to content

GitLab

Explore

Sign in

Primary navigation

Project

P

process_scripts
- Activity
- Members
- Labels
- Issues
  0
- Issue boards
- Milestones
- Iterations
- Wiki
- Requirements
- Releases
- Container Registry
- Environments
- Incidents
- Service Desk

Snippets Groups Projects

NGS CLIA Lab
process_scripts
Commits
a0f3cd94

Commit a0f3cd94 authored 5 years ago by

Brandi Cantarel

Downloads
- Plain Diff

Merge branch 'master' of git.biohpc.swmed.edu:BICF/Astrocyte/process_scripts

parents 0398b847 9c238995

Changes 10

Hide whitespace changes

Inline Side-by-side

Showing

alignment/dnaseqalign.sh 10 additions, 12 deletions

alignment/dnaseqalign.sh
variants/cnvkit.sh 13 additions, 5 deletions

variants/cnvkit.sh
variants/filter_cnvkit.pl 6 additions, 10 deletions

variants/filter_cnvkit.pl
variants/formatVcfCNV.pl 78 additions, 0 deletions

variants/formatVcfCNV.pl
variants/gatkrunner.sh 3 additions, 3 deletions

variants/gatkrunner.sh
variants/germline_vc.sh 1 addition, 1 deletion

variants/germline_vc.sh
variants/itdseek.sh 1 addition, 1 deletion

variants/itdseek.sh
variants/norm_annot.sh 1 addition, 11 deletions

variants/norm_annot.sh
variants/somatic_vc.sh 1 addition, 1 deletion

variants/somatic_vc.sh
variants/svcalling.sh 1 addition, 1 deletion

variants/svcalling.sh

with 115 additions and 45 deletions

0% or .

You are about to add 0 people to the discussion. Proceed with caution.

Finish editing this message first!

Please register or sign in to comment