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Commit 6c0e8739 authored by Brandi Cantarel's avatar Brandi Cantarel
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missing snpeffgeno option

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......@@ -33,6 +33,10 @@ else
usage
fi
if [[ -z $snpeffgeno ]]
then
snpeffgeno='GRCh38.86'
fi
source /etc/profile.d/modules.sh
module load bedtools/2.26.0 samtools/1.6 bcftools/1.6 snpeff/4.3q
......
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