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Commit 0f5e4dca authored by Brandi Cantarel's avatar Brandi Cantarel
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update fpkm

parent 03ded405
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...@@ -32,7 +32,8 @@ foreach $file (@files) { ...@@ -32,7 +32,8 @@ foreach $file (@files) {
while (my $line = <IN>) { while (my $line = <IN>) {
chomp($line); chomp($line);
my ($ensid,$gene,$chr,$strand,$start,$end,$cov,$fpkm,$tmp) = split(/\t/,$line); my ($ensid,$gene,$chr,$strand,$start,$end,$cov,$fpkm,$tmp) = split(/\t/,$line);
$cts{$ensid}{$sample} = $fpkm; my ($ens,$version) = split(/\./,$ensid);
$cts{$ens}{$sample} = $fpkm;
} }
close IN; close IN;
} }
......
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