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Created with Raphaël 2.2.06Jan54330Dec292827171475230Nov20191413121110931Oct20Sep14131211109131Aug2726252420191615141312111087654331Jul3023151420May13116542130Apr27252422732130Mar27Fix fail on ambiguous speciesFix log in infer species if ambiguousFix log in infer species if ambiguousUpdate README.mdUpdate README.mdFix readmeFix readmeUpdate readme with errorsFix upload execution run run conditionUpdate ChangelogFix bdbag fetch scriptFix species error variableFix species error variableAdd ambiguous species error reportingadd --debug to bdbag fetchFix inputBag local outputFix align sample combineFix align sample combineAlow 1 retry of getData and trimDataFix combines with new errorsFix pre error details formatFix fail pre execution runFix fail pre execution runFix fail pre execution runFix fail pre execution runFix fail pre execution runFix parseFix some bad variablesChange set to intoAdd check for mismatch fastq read countUse larger nodes for trim processUse set for lonely variableTry double [ on if orRemove ci singulatity cacheFix ci singularity cache dirFix stranded testTry and set singularity cache for ciFix bad variable in parseFix extra quotes in paresFix parse raw ends