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GUDMAP_RBK
RNA-seq
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b89416b523c42fe2fb154c0a2f28bbbe5aa3b265
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2
develop
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master
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v2.0.1
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Created with Raphaël 2.2.0
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Sep
Remove processes from AWS configs
Update dag
Fix dataQC pytest
Add && to multiline inferMetadata unit ci
Move parseMetadata unit ci if statements to single line
Fix inferMetadata unit
Fix ci yml syntax
Add unit CI test for (new) inferMetadata
Fix align unit summary output
Change parseMetadata CI unit test to match new mechanism
Add inference and apply new naming standards
Reorder processes
Merge develop into branch
Add align sampled data
Merge branch '45-parallelizeTin' into 'develop'
Fix nextflow/runner error, change singularity cache, and limit processes in unit ci to 20
Update docs/dag.png
Fix infer.csv output
Deleted dag.png
Merge branch 'develop' into '45-parallelizeTin'
Update pipeline status
Update rna-seq.nf
Update rna-seq.nf
Changed infer.tsv back to infer.csv with appropriate formatting changes.
Added new dag.png
Corrected typo in dedup step.
Used betterd CHRs for tests.
Fixed typo
Updated inferMetadata testing script
Updated inferMetadata testing script
Updated inferMetadata testing script
Update test_dedupReads.py
Update test_dedupReads.py
Update .gitlab-ci.yml
Update .gitlab-ci.yml
Update .gitlab-ci.yml
Update .gitlab-ci.yml
Update .gitlab-ci.yml
Update .gitlab-ci.yml
Update .gitlab-ci.yml