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GUDMAP_RBK
RNA-seq
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9cea75ce29ded88a79fac2b2f57e72578e5e22e2
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develop
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Sep
Fix floating point errors
Fix SE alignSampleSummary output name
Fix SE downsample output optional
Fix report order
Add experiment and study rid's to multiqc report
Add metadata and repRID to multiqc report
Merge branch 'develop' into '10-process.aggregateQC'
Add all reports(except metadata)
Fix next line in trackStart
Fix repRID in trackStart
Add quotes to repRID in trackStart
Fix trackStart
Merge branch 'develop' into '10-process.aggregateQC'
Merge branch 'track.pipeline' into 'develop'
Add extra params for tracking
Merge branch 'track.pipeline' into 'develop'
Add ci flag from tracking
Change pipeline tracking to curl
Add trackStart
Add more columns
Merge branch '47-move.inference' into 'develop'
Resove merge comments from @venkat.malladi
Update README.md
Remove processes from AWS configs
Update dag
Fix dataQC pytest
Add && to multiline inferMetadata unit ci
Move parseMetadata unit ci if statements to single line
Fix inferMetadata unit
Fix ci yml syntax
Add unit CI test for (new) inferMetadata
Fix align unit summary output
Change parseMetadata CI unit test to match new mechanism
Add inference and apply new naming standards
Reorder processes
Merge develop into branch
Add align sampled data
Merge branch '45-parallelizeTin' into 'develop'
Fix nextflow/runner error, change singularity cache, and limit processes in unit ci to 20
Update docs/dag.png