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Created with Raphaël 2.2.04Jan330Dec292827171475230Nov20191413121110931Oct20Sep14131211109131Aug2726252420191615141312111087654331Jul3023151420May13116542130Apr27252422732130Mar2726242321201918161514131298628Feb1817Update test data creation ref locationUpdate split study bash scriptUpdate split study py script nameUpdate test data creationUpdate gtf fna location in ciUpdate bed location in ciUpdate ref versions for ciFix tin by chromosomeUpdate changelogUpdate changelogAdd finalize execution run and add new references using bagUpload se and pe staging integration ci testsMerge branch '89-badges' into 'develop'Remove dev flag for integration testsUpdate default running valuesChange all integration tests to use stagingReplace only master dev tag for badge ciChange color of count badgesRemove extra badge build stepAdd badges for replicate countsFix R version fetch for badgeUpdate badge locations for readmeRemove redundant badges subfolderMake badges subfolderMove badges to badges folder in pagesFix ci lintChange tool badges to bluevioletFix picard version queryChange tool versions to query develop because lates tag doesn't have version collecting yetCollect tool version badgesFix badge script pathUpdate badge script nameFix badge script nameUpdate workflow/scripts/get_updated_badge_info.sh, .gitlab-ci.yml filesRemove tag badges from readmeMerge branch '11-deriva.upload' into 'develop'Update changelogMerge branch 'develop' into '11-deriva.upload'Update README.md with version badgesCheck version using remote