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Created with Raphaël 2.2.04Jan330Dec292827171475230Nov20191413121110931Oct20Sep14131211109131Aug2726252420191615141312111087654331Jul3023151420May13116542130Apr27252422732130Mar27262423212019181615141312Double excape quote on error detailFix elif then in failAdd double excape to new line in failAdd double excape to new line in failAdd double excape to new line in failFix fail lintFix fail if lintUpdate the pipeline error formatFix fail execution run conditionFix fail execution run conditionMake separate process for failing execution runFix bash int if comparison for fastq number checkTry and fix error finalize execution runTry and fix error finalize execution runTry and fix error finalize execution runAdd check for number of fastqsUpdate test execution run rid for ciUpdate test execution run rid for ciUpdate upload test params for ciUse non spike for CI ref testsUpdate references in CIGive split study full path to credentialsUpdate test data creation ref locationUpdate split study bash scriptUpdate split study py script nameUpdate test data creationUpdate gtf fna location in ciUpdate bed location in ciUpdate ref versions for ciFix tin by chromosomeUpdate changelogUpdate changelogAdd finalize execution run and add new references using bagUpload se and pe staging integration ci testsMerge branch '89-badges' into 'develop'Remove dev flag for integration testsUpdate default running valuesChange all integration tests to use stagingReplace only master dev tag for badge ciChange color of count badges