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GUDMAP_RBK
RNA-seq
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5c4e252925521b31623521fdafc3dc4027921001
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develop
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master
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v2.0.1
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0.0.4_indev
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Try excaping sed characters
Fix ci execution run duplicate
Use staging execution run rid in ci
Use staging workgenome for CI uouploadExecutionRun
Use staging workflow RID for CI uouploadExecutionRun
Use staging RIDs for CI uploadExecutionRun
Fix countData
Use staging for CI execution run
Use staging for CI uploadQC
Try and fix CI countData
Use staging for CI uploadExecutionRun
Change process output bag name to uploadProcessedFiles
Use staging for CI uploadInputBag
Fix CI cookie extraction to use staging
Fix bag fetch name for test
Fix convert gene symbol script to use new countTable name
Fix CI unit test for getData
Update replicate bdbag export config name
Check for old processed files and delete catalog entry
Check for old mRNA QC and delete catalog entry
Change Workflow name
Prep for version 0.1.0_indev
Change processed file ouputs to use _ as separator for custom txt
Add date to input/output bag
Change hatrac path upload for input/output bags
Merge branch '75-no.upload' into '11-deriva.upload'
Start changing model
Debug process file deriva upload & no retry for integration
Update docs
Do no upload override CI integration
Use optional upload for output bag creation
Add optional upload param
Fix output bag unit test
Update docs
Update merge request template
Update software versions
Add Output Bag
Fix upload output bag ci unit test
Fix upload output bag ci unit test
Fix upload output bag ci unit test