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Created with Raphaël 2.2.05Mar432128Feb242319181615131211109874129Jan282726252019181514121110987654330Dec292827171475230Nov20Fix ci lintAdd test fastq upload to dnanexus env ciMerge branch 'seqwho' into 'develop'Fix number order for references.mdFix nextflow.config reference for badgesAllow uploadExexutionRun to happen with pipeline error(metadata match)Update DAGFix when'sRemove species error ciRemove species error ciFix uploadQC_fail inputChange ci fail ambiguous species to species errorUpdate dagUpdate readmeUpdate versionsFix versionsSplit version linesFix ciNot stop after the first 3 imagesNot stop after the first 3 imagesNot stop after the first 3 imagesOnly singularity pull 3 containers at a timeOnly singularity pull 5 containers at a timeMake cache dir at start of ciFix cache folderFix cache folderTry to fix cache dirRemove chmodTry to set restrictive permissions for cacheSet permissions for cached dirchmod 775 cached imagesPut unit cache container extract on new linesUpdate reference and version filesUse cached images for unit testsPut trackStart container in nextflow.configTry to not error on version collectTemp remove seqwho versionSep images for version collecitonReturn echo to sif namesFix sif names