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Created with Raphaël 2.2.029Dec2827171475230Nov20191413121110931Oct20Sep14131211109131Aug2726252420191615141312111087654331Jul3023151420May13116542130Apr27252422732130Mar2726242321201918161514131298628Feb18171514121110743230Jan29282724Remove unecessary quotes from ref querry in ciAdd echo to see what's going wrong with mouse_dev ref ciFix mouse version variable name in ciFix get data unit test to use new test dataChange python and bash scripts to new naming conventionUpdate changelogAdd date tail for test input bagFix ref querryFix mouse ref testsFix multiqc config for updated versionFix input bag overrideUpdate inputs and outputs of make feature counts ci unit test match new formatAdd readlength to meta testNew test data with txtUpdate unit test to use stagingRevert to old replicate in tests and ciRevert test data creation to oldChange to new-new test dataUpdate all tests with new test data repUpdate CI unit tests to use new test dataUpdate test data creation for staging new replicateUse updated input bag nameUse updated input bag nameUse updated input bag nameFix docker image name in pipelineUpdate docker images in pipeline to productionUpdate software versionsFix trim ci unit PE file output testChange ref ci test namesFix python container in ciFix python container in ciFix wrong container for deriva in ciUse production docker images for CIAdd ref ci test for productionFix token error in ci unit upload processed fileAdd ref ci test for stagingAdd ref ci test for stagingFix upload processed file ci unit cookieFix upload processed file ci unitFix upload processed file ci unit