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Created with Raphaël 2.2.029Dec2827171475230Nov20191413121110931Oct20Sep14131211109131Aug2726252420191615141312111087654331Jul3023151420May13116542130Apr27252422732130Mar2726242321201918161514131298628Feb18171514121110743230Jan292827242322Update inputs and outputs of make feature counts ci unit test match new formatAdd readlength to meta testNew test data with txtUpdate unit test to use stagingRevert to old replicate in tests and ciRevert test data creation to oldChange to new-new test dataUpdate all tests with new test data repUpdate CI unit tests to use new test dataUpdate test data creation for staging new replicateUse updated input bag nameUse updated input bag nameUse updated input bag nameFix docker image name in pipelineUpdate docker images in pipeline to productionUpdate software versionsFix trim ci unit PE file output testChange ref ci test namesFix python container in ciFix python container in ciFix wrong container for deriva in ciUse production docker images for CIAdd ref ci test for productionFix token error in ci unit upload processed fileAdd ref ci test for stagingAdd ref ci test for stagingFix upload processed file ci unit cookieFix upload processed file ci unitFix upload processed file ci unitFix upload processed file ci unitUse the correct docker container for upload processed files ci unitTry and fix upload qc ci unitUse new ouput bag name typeFix upload processed file processAdd delete entry sctrpt to upload processed file processFix exists in upload processed file processRemove unnecessary echo note in upload qc unit testInclude raw count in qc upload unit testUpdate naming convention in dataQCAdd unnecessary tab in ci