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Resolve "Add input bagit to ouput"

Gervaise Henry requested to merge 62-output.inputBagit into develop


  • inputBag
  • outputBag

Fix trim_galore params

PR checklist

  • This comment contains a description of changes (with reason)
  • If you've fixed a bug or added code that should be tested, add tests!
  • Documentation in docs is updated
  • Replace dag.png with the most recent CI pipleine integrated_pe artifact
  • is updated
  • is updated
  • is updated with new contributors
  • Docker images moved to production release and changed in pipeline
  • Docker images used in the CI unit tests match those used in pipeline

/cc @ghenry @venkat.malladi

Edited by Gervaise Henry

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