Commits · 4bf36daba15b02cf64bb0d9ca3a3065249eac806 · GUDMAP_RBK / RNA-seq

Mar 19, 2021
- Add back consistent test · 4bf36dab
  Gervaise Henry authored 4 years ago
  
  4bf36dab
- Add note in readme · 09f0922a
  Gervaise Henry authored 4 years ago
  
  09f0922a
- Fix aws batch submit json localtion · 3b4e91d2
  Gervaise Henry authored 4 years ago
  
  3b4e91d2
- Finalize aws env ci + docs · 09bd8e2b
  Gervaise Henry authored 4 years ago
  
  09bd8e2b
- Trim whitespace from aws status · 7d1ab439
  Gervaise Henry authored 4 years ago
  
  7d1ab439
- Temp remove aws check for failed · a6529852
  Gervaise Henry authored 4 years ago
  
  a6529852
- Try to fix the aws succeeded test · 0432c2a7
  Gervaise Henry authored 4 years ago
  
  0432c2a7
- Downgrade alignData for dnanexus and aws · 35aaa9d1
  Gervaise Henry authored 4 years ago
  
  35aaa9d1
Mar 18, 2021
- Downgrade alignData mem requirement to 64G in dnanexus and aws configs · aa884fb9
  Gervaise Henry authored 4 years ago
  
  aa884fb9
- Resove develop:env-ci merge conflict · ed1e0eb5
  Gervaise Henry authored 4 years ago
  
  ed1e0eb5
- Change aws status check sleep to 5 mins · f9e5dfd2
  Gervaise Henry authored 4 years ago
  
  f9e5dfd2
- Re-split exports · 738130f8
  Gervaise Henry authored 4 years ago
  
  738130f8
- Try to fix batch submit command · 145b5e6c
  Gervaise Henry authored 4 years ago
  
  145b5e6c
- Downgrade aws cli in ci · 95e76ad2
  Gervaise Henry authored 4 years ago
  
  95e76ad2
- Split aws env ci steps · 9c6cd2bf
  Gervaise Henry authored 4 years ago
  
  9c6cd2bf
- Fic ci lint · 0d9caefa
  Gervaise Henry authored 4 years ago
  
  0d9caefa
- Add aws env test to ci · 53d663a8
  Gervaise Henry authored 4 years ago
  
  53d663a8
- Fix experiment settings output · aa7935fa
  Gervaise Henry authored 4 years ago
  
  aa7935fa
- Make dummy R2 fastq if none present · 4726f503
  Gervaise Henry authored 4 years ago
  
  4726f503
- Remove space from experiment settings output file · d28de7d1
  Gervaise Henry authored 4 years ago
  
  d28de7d1
- Fix aws config · 932cefd3
  Gervaise Henry authored 4 years ago
  
  932cefd3
- Add aws profile · 6da7a31c
  Gervaise Henry authored 4 years ago
  
  6da7a31c
- Fix dnanexus.config · 515b0f10
  Gervaise Henry authored 4 years ago
  
  515b0f10
Mar 12, 2021
- Trim - from versions for badge creations · f8073da8
  Gervaise Henry authored 4 years ago
  
  v2.0.0rc02
  
  f8073da8
- Version to v2.0.0rc02 in manifest · b7fe3901
  Gervaise Henry authored 4 years ago
  
  b7fe3901
- Merge branch 'update.containers' into 'develop' · f2425d63
  Gervaise Henry authored 4 years ago
```
Update.containers

See merge request !73
```
  f2425d63
- Update dag · 83add5e0
  Gervaise Henry authored 4 years ago
  
  83add5e0
Mar 11, 2021
- Finish update seqwho process to match updated version · be41d00d
  Gervaise Henry authored 4 years ago
  
  be41d00d
- Update seqwho process to match updated version · c38dc9cb
  Gervaise Henry authored 4 years ago
  
  c38dc9cb
- Update references.yml · 0f7d7316
  Gervaise Henry authored 4 years ago
  
  0f7d7316
- Update refs including seqwho to biorxiv · 84fa8870
  Gervaise Henry authored 4 years ago
  
  84fa8870
- Update seqwho version to 1.0.0 · 2f95eb9a
  Gervaise Henry authored 4 years ago
  
  2f95eb9a
Mar 09, 2021
- Fix dx status check · 6afd7f22
  Gervaise Henry authored 4 years ago
  
  6afd7f22
- Change dx env ci if to single line · f82b6699
  Gervaise Henry authored 4 years ago
  
  f82b6699
- Change xsmall fastqs to 10K · 791fd852
  Gervaise Henry authored 4 years ago
  
  791fd852
- Merge branch 'update.containers' into 'develop' · ec949139
  Gervaise Henry authored 4 years ago
```
Update.containers

See merge request !72
```
  ec949139
Mar 08, 2021
- Update dnanexus badge messages · f1115368
  Gervaise Henry authored 4 years ago
  
  f1115368
- Update changelog · e3366771
  Gervaise Henry authored 4 years ago
  
  e3366771
- Update software versons · e679511d
  Gervaise Henry authored 4 years ago
  
  e679511d
- Singularity pull only one container at a time for caching · 16385159
  Gervaise Henry authored 4 years ago
  
  16385159