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Commit fe84267a authored by Gervaise Henry's avatar Gervaise Henry 🤠
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Only singularity pull 3 containers at a time

parent c59b5eb4
2 merge requests!76Develop,!71Seqwho
Pipeline #9434 canceled with stages
in 19 seconds
...@@ -33,7 +33,7 @@ img_cache: ...@@ -33,7 +33,7 @@ img_cache:
stage: singularity stage: singularity
script: script:
- mkdir -p ${dir}cache/ - mkdir -p ${dir}cache/
- cat nextflow.config | grep -oP "container = \K.*" | tr -d "'" | sort | uniq | xargs -P 5 -I {} singularity pull --dir ${dir} 'docker://'{} || true - cat nextflow.config | grep -oP "container = \K.*" | tr -d "'" | sort | uniq | xargs -P 3 -I {} singularity pull --dir ${dir} 'docker://'{} || true
collect: collect:
stage: versions stage: versions
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