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Commit f28563d5 authored by Gervaise Henry's avatar Gervaise Henry :cowboy:
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Add workspace name to appname

parent eef7d414
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2 merge requests!76Develop,!75Env.ci
Pipeline #9476 failed with stages
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......@@ -1025,13 +1025,14 @@ dnanexus:
- ulimit -a
- module load dxtoolkit/python27/0.294.0
- export NXF_XPACK_LICENSE=${nxf_license}
- dx upload ./test_data/auth/c* --path ${dnanexus_workspace}:/ci-env/auth/ --parents --auth-token ${dnanexus_authToken} --workspace-id $dnanexus_workspace}
- dx upload ./test_data/fastq/small/Q-Y5F6_1M.R{1,2}.fastq.gz --path ${dnanexus_workspace}:/ci-env/input/ --parents --auth-token ${dnanexus_authToken} --workspace-id $dnanexus_workspace}
- dx upload ./test_data/auth/c* --path ${dnanexus_workspace}:/ci-env/auth/ --parents --auth-token ${dnanexus_authToken} --workspace-id ${dnanexus_workspace}
- dx upload ./test_data/fastq/small/Q-Y5F6_1M.R{1,2}.fastq.gz --path ${dnanexus_workspace}:/ci-env/input/ --parents --auth-token ${dnanexus_authToken} --workspace-id ${dnanexus_workspace}
- >
dx run --auth-token ${dnanexus_authToken} --workspace-id $dnanexus_workspace} nf-dxapp-bicf \
dx run --auth-token ${dnanexus_authToken} --workspace-id ${dnanexus_workspace} ${dnanexus_workspace}:nf-dxapp-bicf \
--watch \
--delay-workspace-destruction \
--instance-type mem1_ssd1_v2_x16 \
--input-json "$(envsubst < ./docs/nxf_dnanexus-ci-test.json)"
after_script:
- dx rm ${dnanexus_workspace}:/ci-env/auth/c* --all
- dx rm ${dnanexus_workspace}:/ci-env/input/Q-Y5F6_1M.R{1,2}.fastq.gz --all
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