CHANGELOG.md

README.md

cleanup.sh

conf/.gitkeep

conf/Execution_Run_For_Output_Bag.json

conf/Replicate_For_Input_Bag.json

conf/multiqc_config.yaml

docs/dnanexusExample.json

main.nf

nextflow.config

nextflowConf/.gitkeep

nextflowConf/Execution_Run_For_Output_Bag.json

nextflowConf/Replicate_For_Input_Bag.json

nextflowConf/aws.config

nextflowConf/bdbag.json

nextflowConf/biohpc.config

nextflowConf/biohpc_local.config

nextflowConf/biohpc_max.config

nextflowConf/dnanexus.config

nextflowConf/local.config