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Commit df4faf8d authored by Gervaise Henry's avatar Gervaise Henry :cowboy:
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Fix study rid in upload process file ci unit test

parent d35b3d62
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2 merge requests!58Develop,!53Resolve "process_derivaUpload"
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.gitlab-ci.yml
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...@@ -351,7 +351,7 @@ uploadProcessedFile: ...@@ -351,7 +351,7 @@ uploadProcessedFile:
script: script:
- ln -sfn `readlink -e ./test_data/auth/credential.json` ./credential.json - ln -sfn `readlink -e ./test_data/auth/credential.json` ./credential.json
- echo THIS IS A TEST FILE > 17-BTFJ_test.csv - echo THIS IS A TEST FILE > 17-BTFJ_test.csv
- mkdir -p ./deriva/Seq/pipeline/17-BTFA/17-BTG4/ - mkdir -p ./deriva/Seq/pipeline/17-BTFE/17-BTG4/
- mv 17-BTFJ_test.csv ./deriva/Seq/pipeline/17-BTFA/17-BTG4/17-BTFJ_test.csv - mv 17-BTFJ_test.csv ./deriva/Seq/pipeline/17-BTFA/17-BTG4/17-BTFJ_test.csv
- > - >
exist=$(singularity run 'docker://gudmaprbk/deriva1.3:1.0.0' curl -s https://staging.gudmap.org/ermrest/catalog/2/entity/RNASeq:Processed_File/Replicate=17-BTFJ) && exist=$(singularity run 'docker://gudmaprbk/deriva1.3:1.0.0' curl -s https://staging.gudmap.org/ermrest/catalog/2/entity/RNASeq:Processed_File/Replicate=17-BTFJ) &&
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