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Commit d16e6c86 authored by Jonathan Gesell's avatar Jonathan Gesell
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Updated output file names for unit test.

parent 91a9ea5f
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2 merge requests!37v0.0.1,!17Resolve "process_dedup"
Pipeline #5850 passed with stages
in 1 hour, 17 minutes, and 3 seconds
......@@ -13,13 +13,13 @@ logs_output_path = os.path.dirname(os.path.abspath(__file__)) + \
@pytest.mark.dedupData
def test_dedupData_se():
assert os.path.exists(os.path.join(data_output_path, '16-1ZX4.deduped.bm'))
assert os.path.exists(os.path.join(data_output_path, '16-1ZX4.deduped.Metrics.txt'))
assert os.path.exists(os.path.join(data_output_path, 'Q-Y5JA_1M.se.deduped.bam'))
assert os.path.exists(os.path.join(data_output_path, 'Q-Y5JA_1M.se.deduped.Metrics.txt'))
@pytest.mark.dedupData
def test_dedupData_pe():
assert os.path.exists(os.path.join(data_output_path, 'Q-Y5JA.deduped.bm'))
assert os.path.exists(os.path.join(data_output_path, 'Q-Y5JA.deduped.Metrics.txt'))
assert os.path.exists(os.path.join(data_output_path, 'Q-Y5JA_1M.pe.deduped.bam'))
assert os.path.exists(os.path.join(data_output_path, 'Q-Y5JA_1M.pe.deduped.Metrics.txt'))
@pytest.mark.dedupLogs
......
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