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GUDMAP_RBK
RNA-seq
Commits
c7178e06
Commit
c7178e06
authored
4 years ago
by
Venkat Malladi
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Fix spelling error
parent
573ff53b
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!58
Develop
,
!46
Update consistency checks to be fully in python.
Pipeline
#8338
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in 3 hours, 59 minutes, and 12 seconds
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workflow/tests/test_consistency.py
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workflow/tests/test_consistency.py
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c7178e06
...
...
@@ -18,7 +18,7 @@ def test_consistencySE():
with
open
(
os
.
path
.
join
(
test_output_path
,
'
SE_multiqc_data.json
'
))
as
f
:
assigned_reads_json
=
json
.
load
(
f
)
assigned_rea
assigned_reads
ds
=
assigned_reads_json
[
'
report_general_stats_data
'
][
4
][
'
16-1ZX4
'
][
'
Assigned
'
]
assigned_reads
=
assigned_reads_json
[
'
report_general_stats_data
'
][
4
][
'
16-1ZX4
'
][
'
Assigned
'
]
assert
assigned_reads
==
7742416
...
...
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