Add upload output bag (ab0e4bb6) · Commits · GUDMAP_RBK / RNA-seq · GitLab

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GUDMAP_RBK
RNA-seq
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ab0e4bb6

Commit ab0e4bb6 authored 4 years ago by

Gervaise Henry

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Add upload output bag

parent e4b99530

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2 merge requests!58Develop,!53Resolve "process_derivaUpload"

Pipeline #8467 failed with stages

in 1 minute and 37 seconds

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.gitlab-ci.yml 33 additions, 33 deletions

.gitlab-ci.yml
workflow/conf/aws.config 8 additions, 0 deletions

workflow/conf/aws.config
workflow/conf/biohpc.config 3 additions, 0 deletions

workflow/conf/biohpc.config
workflow/nextflow.config 3 additions, 0 deletions

workflow/nextflow.config
workflow/rna-seq.nf 78 additions, 3 deletions

workflow/rna-seq.nf
workflow/scripts/uploadOutputBag.py 48 additions, 0 deletions

workflow/scripts/uploadOutputBag.py

with 173 additions and 36 deletions

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