Merge branch '14-UnitTest' into 'develop'

Resolve "Add Unit Tests for splitData and getData processes"

Closes #14

See merge request !5

.gitlab-ci.yml

+before_script:
+  - module add  python/3.6.1-2-anaconda
+  - pip install --user pytest-pythonpath==0.7.1 pytest-cov==2.5.1
+  - module load singularity/3.0.2
+  - ln -sfn /project/BICF/BICF_Core/shared/gudmap/cookies/deriva-cookies.txt ./test_data/
+  - ln -sfn /project/BICF/BICF_Core/shared/gudmap/test_data/File_Q-Y53P.zip ./test_data/
+
+stages:
+  - unit
+
+unit:
+  stage: unit
+  script:
+  - singularity run 'docker://bicf/bdbag:1.0' bdbag --materialize ./test_data/File_Q-Y53P.zip
+  - singularity run 'docker://bicf/bdbag:1.0' bdbag --validate full ./test_data/File_Q-Y53P/
+  - if [[ $(md5sum test_data/File_Q-Y53P/data/assets/Study/Q-Y4H0/Experiment/Q-Y4BY/Replicate/Q-Y5F8/hMARIS_SIX2+_RiboDep#1.gene.rpkm.txt | awk '{ print $1 }') != $(cat test_data/File_Q-Y53P/data/File.csv | cut -d ',' -f10 | tail -1) ]]; then exit 21; fi;

CHANGELOG.md

@@ -2,5 +2,6 @@
 **User Facing**
 
 **Background**
+* Implementation of CI
 
 *Known Bugs*