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Commit 770a16cf authored by Gervaise Henry's avatar Gervaise Henry :cowboy:
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Update .gitlab-ci.yml

parent f4965121
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1 merge request!43Develop
Pipeline #8043 passed with stage
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...@@ -215,7 +215,8 @@ integration_se: ...@@ -215,7 +215,8 @@ integration_se:
stage: integration stage: integration
only: [merge_requests] only: [merge_requests]
except: except:
- $CI_MERGE_REQUEST_TARGET_BRANCH_NAME =~ /master/ variables:
- $CI_MERGE_REQUEST_TARGET_BRANCH_NAME =~ /master/
script: script:
- hostname - hostname
- ulimit -a - ulimit -a
...@@ -238,7 +239,8 @@ integration_pe: ...@@ -238,7 +239,8 @@ integration_pe:
stage: integration stage: integration
only: [merge_requests] only: [merge_requests]
except: except:
- $CI_MERGE_REQUEST_TARGET_BRANCH_NAME =~ /master/ variables:
- $CI_MERGE_REQUEST_TARGET_BRANCH_NAME =~ /master/
script: script:
- hostname - hostname
- ulimit -a - ulimit -a
...@@ -262,7 +264,8 @@ override_inputBag: ...@@ -262,7 +264,8 @@ override_inputBag:
stage: integration stage: integration
only: [merge_requests] only: [merge_requests]
except: except:
- $CI_MERGE_REQUEST_TARGET_BRANCH_NAME =~ /master/ variables:
- $CI_MERGE_REQUEST_TARGET_BRANCH_NAME =~ /master/
script: script:
- hostname - hostname
- ulimit -a - ulimit -a
...@@ -283,7 +286,8 @@ override_fastq: ...@@ -283,7 +286,8 @@ override_fastq:
stage: integration stage: integration
only: [merge_requests] only: [merge_requests]
except: except:
- $CI_MERGE_REQUEST_TARGET_BRANCH_NAME =~ /master/ variables:
- $CI_MERGE_REQUEST_TARGET_BRANCH_NAME =~ /master/
script: script:
- hostname - hostname
- ulimit -a - ulimit -a
...@@ -304,7 +308,8 @@ override_species: ...@@ -304,7 +308,8 @@ override_species:
stage: integration stage: integration
only: [merge_requests] only: [merge_requests]
except: except:
- $CI_MERGE_REQUEST_TARGET_BRANCH_NAME =~ /master/ variables:
- $CI_MERGE_REQUEST_TARGET_BRANCH_NAME =~ /master/
script: script:
- hostname - hostname
- ulimit -a - ulimit -a
...@@ -326,7 +331,8 @@ consistency: ...@@ -326,7 +331,8 @@ consistency:
stage: consistency stage: consistency
only: [merge_requests] only: [merge_requests]
except: except:
- $CI_MERGE_REQUEST_TARGET_BRANCH_NAME =~ /master/ variables:
- $CI_MERGE_REQUEST_TARGET_BRANCH_NAME =~ /master/
script: script:
- grep -m 1 \"Assigned\":.[0-9] SE_multiqc_data.json | grep -oe '\([0-9.]*\)' > assignedSE.txt - grep -m 1 \"Assigned\":.[0-9] SE_multiqc_data.json | grep -oe '\([0-9.]*\)' > assignedSE.txt
- grep -m 1 \"Assigned\":.[0-9] PE_multiqc_data.json | grep -oe '\([0-9.]*\)' > assignedPE.txt - grep -m 1 \"Assigned\":.[0-9] PE_multiqc_data.json | grep -oe '\([0-9.]*\)' > assignedPE.txt
......
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