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GUDMAP_RBK
RNA-seq
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698ec0c7
Commit
698ec0c7
authored
4 years ago
by
Gervaise Henry
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Update CHANGELOG.md, workflow/nextflow.config files
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CHANGELOG.md
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CHANGELOG.md
workflow/nextflow.config
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workflow/nextflow.config
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CHANGELOG.md
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# v0.0.3 (in development)
# v0.0.4 (in development)
**User Facing**
*
**Background**
*
*Known Bugs*
*
outputBag does not contain fetch for processed data
*
Does not include automatic data upload
*
Override params (inputBag, fastq, species) aren't checked for integrity
<hr>
# v0.0.3
**User Facing**
*
TPM table:
*
Add Ensembl Gene ID
...
...
@@ -47,4 +61,4 @@
**INITIAL BETA VERSION**
\
Does not include automatic data upload
\
This version is for initial upload of test data to GUDMAP/RBK data-hub for internal integration
<hr>
\ No newline at end of file
<hr>
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workflow/nextflow.config
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@@ -97,6 +97,6 @@ manifest {
homePage
=
'https://git.biohpc.swmed.edu/gudmap_rbk/rna-seq'
description
=
'This pipeline was created to be a standard mRNA-sequencing analysis pipeline which integrates with the GUDMAP and RBK consortium data-hub.'
mainScript
=
'rna-seq.nf'
version
=
'v0.0.
3
_indev'
version
=
'v0.0.
4
_indev'
nextflowVersion
=
'>=19.09.0'
}
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