workflow/conf/biohpc_max.config

workflow/conf/conda.env.bdbag.yml

workflow/conf/multiqc_config.yaml

workflow/conf/ondemand.config

workflow/conf/replicate_export_config.json

workflow/conf/spot.config

workflow/docker/.gitkeep

workflow/docker/getData

workflow/docker/images/.gitkeep

workflow/docker/temp

workflow/nextflow.config

workflow/rna-seq.nf

workflow/scripts/bdbagFetch.sh

workflow/scripts/calculateTPM.R

workflow/scripts/convertGeneSymbols.R

workflow/scripts/inferMeta.sh

workflow/scripts/parseMeta.py

workflow/scripts/renameFastq.sh

workflow/scripts/splitStudy.py

workflow/scripts/splitStudy.sh