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Commit 4346896f authored by Jonathan Gesell's avatar Jonathan Gesell
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Changed infer.tsv back to infer.csv with appropriate formatting changes.

parent e430479f
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3 merge requests!37v0.0.1,!27Develop,!26Resolve "Chunk bam for parallel tin calculation"
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in 8 minutes and 21 seconds
......@@ -487,6 +487,6 @@ process inferMetadata {
done | parallel -j `nproc` -k > ${repRID}.sorted.deduped.tin.xls 2>>${repRID}.rseqc.err
# write infered metadata to file
echo -e "\${endness}'\\t'\${stranded}'\\t'\${strategy}'\\t'\${percentF}'\\t'\${percentR}'\\t'\${fail}" > infer.tsv
echo -e "\${endness}','\${stranded}','\${strategy}','\${percentF}','\${percentR}','\${fail}" > infer.csv
"""
}
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