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Commit 2c5bbdc1 authored by Gervaise Henry's avatar Gervaise Henry :cowboy:
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Fix exit for tests in calculateTPM.R

parent 800dae10
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2 merge requests!37v0.0.1,!22Resolve "process_count"
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workflow/scripts/calculateTPM.R
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......@@ -8,11 +8,9 @@ opt=parse_args(OptionParser(option_list=option_list))
rm(option_list)
if (!("count" %in% names(opt))){
print("No count file passed, exiting.")
exit()
stop("No count file passed, exiting.")
} else if (!file.exists(opt$count)) {
print("No count file passed, exiting.")
exit()
stop("No count file passed, exiting.")
}
repRID <- basename(gsub(".featureCounts","",opt$count))
......
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