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Commit 2c26323b authored by Gervaise Henry's avatar Gervaise Henry :cowboy:
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Fix infer metadata

parent 22e2cb04
2 merge requests!58Develop,!56Resolve "Detect error in inferMetadata for tracking"
Pipeline #8876 passed with stages
in 2 minutes and 52 seconds
...@@ -840,7 +840,7 @@ process inferMetadata { ...@@ -840,7 +840,7 @@ process inferMetadata {
fi fi
fi fi
if [ "\${speciesError" == false } && [ "${speciesForce}" = "" ] if [ "\${speciesError" == false ] && [ "${speciesForce}" = "" ]
then then
# infer experimental setting from dedup bam # infer experimental setting from dedup bam
echo -e "LOG: infer experimental setting from dedup bam" >> ${repRID}.inferMetadata.log echo -e "LOG: infer experimental setting from dedup bam" >> ${repRID}.inferMetadata.log
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